Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RC3H2Q9HBD1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 MIR663A-201ENST00000385250 93 ntBASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 AC087239.1-201ENST00000622671 572 ntBASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RC3H2Q9HBD1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 AL355802.2-201ENST00000402069 882 ntBASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RC3H2Q9HBD1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 OXCT2P1-201ENST00000447263 1535 ntBASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 AL353803.4-201ENST00000565882 1934 ntBASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RC3H2Q9HBD1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 AC079140.4-201ENST00000507448 529 ntBASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 MFSD11-216ENST00000590393 1141 ntBASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.59■■□□□ 1.37
RC3H2Q9HBD1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.58■■□□□ 1.37
RC3H2Q9HBD1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.58■■□□□ 1.37
RC3H2Q9HBD1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RC3H2Q9HBD1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 LINC00543-201ENST00000567234 1845 ntBASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.57■■□□□ 1.36
RC3H2Q9HBD1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RC3H2Q9HBD1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 AC142086.2-201ENST00000569753 217 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms