Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R3EQ9H7J1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R3EQ9H7J1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R3EQ9H7J1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 MIR4787-201ENST00000607364 84 ntBASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 AC092028.1-203ENST00000608262 953 ntBASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 AC092667.1-201ENST00000434301 2586 ntBASIC19.35■□□□□ 0.69
PPP1R3EQ9H7J1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R3EQ9H7J1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 FAM99A-202ENST00000538190 1989 ntBASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP1R3EQ9H7J1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP1R3EQ9H7J1 AC005229.4-201ENST00000610085 2198 ntBASIC19.33■□□□□ 0.68
PPP1R3EQ9H7J1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP1R3EQ9H7J1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 KRT125P-201ENST00000546827 989 ntBASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R3EQ9H7J1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 TSPY9P-201ENST00000440215 945 ntBASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 TSPY11P-201ENST00000442607 1045 ntBASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 Z92544.1-202ENST00000571933 1220 ntBASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms