Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 AL138724.1-201ENST00000606771 1088 ntBASIC21.15■□□□□ 0.98
SOX17Q9H6I2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX17Q9H6I2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SOX17Q9H6I2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SOX17Q9H6I2 AL137060.1-201ENST00000618151 2648 ntBASIC21.14■□□□□ 0.98
SOX17Q9H6I2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SOX17Q9H6I2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 AP001330.3-201ENST00000520123 633 ntBASIC21.14■□□□□ 0.97
SOX17Q9H6I2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 MIR3181-201ENST00000578512 73 ntBASIC21.14■□□□□ 0.97
SOX17Q9H6I2 AC011298.3-201ENST00000615796 283 ntBASIC21.14■□□□□ 0.97
SOX17Q9H6I2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SOX17Q9H6I2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 AC092068.2-201ENST00000590491 1708 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 ZNRF2P3-201ENST00000424200 374 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 pRNA.6-201ENST00000610482 90 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 pRNA.5-201ENST00000612139 90 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 pRNA.11-201ENST00000618423 90 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 pRNA.13-201ENST00000619112 90 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 AL136967.2-201ENST00000623968 743 ntBASIC21.13■□□□□ 0.97
SOX17Q9H6I2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.13■□□□□ 0.97
SOX17Q9H6I2 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
SOX17Q9H6I2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 AC137767.1-201ENST00000602918 1920 ntBASIC21.12■□□□□ 0.97
SOX17Q9H6I2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX17Q9H6I2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 MIR939-201ENST00000401314 82 ntBASIC21.11■□□□□ 0.97
SOX17Q9H6I2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SOX17Q9H6I2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 AC127496.7-201ENST00000625110 1798 ntBASIC21.1■□□□□ 0.97
SOX17Q9H6I2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOX17Q9H6I2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms