Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 AC137630.3-201ENST00000607245 391 ntBASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZCCHC4Q9H5U6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZCCHC4Q9H5U6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZCCHC4Q9H5U6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.17■□□□□ 0.66
ZCCHC4Q9H5U6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZCCHC4Q9H5U6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 AL031848.2-201ENST00000607670 837 ntBASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 AC005703.6-201ENST00000623265 1329 ntBASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZCCHC4Q9H5U6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZCCHC4Q9H5U6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
ZCCHC4Q9H5U6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
ZCCHC4Q9H5U6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.14■□□□□ 0.66
ZCCHC4Q9H5U6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 PKD1P6-201ENST00000343738 4769 ntBASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 MIR6722-201ENST00000617286 78 ntBASIC19.14■□□□□ 0.65
ZCCHC4Q9H5U6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms