Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 TERF1P2-201ENST00000583350 1212 ntBASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATXN3LQ9H3M9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 NTF6G-201ENST00000591094 616 ntBASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 AL137784.2-201ENST00000607332 1000 ntBASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATXN3LQ9H3M9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATXN3LQ9H3M9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATXN3LQ9H3M9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATXN3LQ9H3M9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 RARRES2P11-201ENST00000635158 484 ntBASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 AC068587.7-201ENST00000641602 218 ntBASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATXN3LQ9H3M9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 AC092437.1-201ENST00000624794 1048 ntBASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATXN3LQ9H3M9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ATXN3LQ9H3M9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
ATXN3LQ9H3M9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms