Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.88■□□□□ 0.93
VCXQ9H320 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VCXQ9H320 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCXQ9H320 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.87■□□□□ 0.93
VCXQ9H320 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
VCXQ9H320 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VCXQ9H320 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.87■□□□□ 0.93
VCXQ9H320 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
VCXQ9H320 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCXQ9H320 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VCXQ9H320 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 AC079630.1-202ENST00000618127 1840 ntBASIC20.86■□□□□ 0.93
VCXQ9H320 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VCXQ9H320 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VCXQ9H320 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCXQ9H320 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
VCXQ9H320 AL022069.1-201ENST00000568025 1636 ntBASIC20.86■□□□□ 0.93
VCXQ9H320 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.85■□□□□ 0.93
VCXQ9H320 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCXQ9H320 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCXQ9H320 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCXQ9H320 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.84■□□□□ 0.93
VCXQ9H320 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VCXQ9H320 AL162393.1-201ENST00000437852 946 ntBASIC20.84■□□□□ 0.93
VCXQ9H320 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
VCXQ9H320 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCXQ9H320 AC080038.3-201ENST00000623346 1952 ntBASIC20.84■□□□□ 0.93
VCXQ9H320 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCXQ9H320 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCXQ9H320 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCXQ9H320 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCXQ9H320 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCXQ9H320 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
VCXQ9H320 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VCXQ9H320 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.83■□□□□ 0.93
VCXQ9H320 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.83■□□□□ 0.93
VCXQ9H320 DUX4L11-201ENST00000611504 1267 ntBASIC20.83■□□□□ 0.93
VCXQ9H320 DUX4L12-201ENST00000614593 1267 ntBASIC20.83■□□□□ 0.93
VCXQ9H320 DUX4L14-201ENST00000621227 1267 ntBASIC20.83■□□□□ 0.93
VCXQ9H320 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.83■□□□□ 0.93
VCXQ9H320 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCXQ9H320 AC090877.2-201ENST00000558441 1738 ntBASIC20.83■□□□□ 0.92
VCXQ9H320 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCXQ9H320 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VCXQ9H320 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCXQ9H320 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
VCXQ9H320 SMPD5-203ENST00000639008 1464 ntBASIC20.82■□□□□ 0.92
VCXQ9H320 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms