Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 AC006455.2-201ENST00000429931 906 ntBASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A1Q9H2H9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SLC38A1Q9H2H9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 CA15P2-201ENST00000611168 834 ntBASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 C11orf96-202ENST00000528572 1834 ntBASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC38A1Q9H2H9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 AL512631.2-201ENST00000604634 923 ntBASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 AC099791.2-201ENST00000605725 427 ntBASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC38A1Q9H2H9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 AL356441.2-201ENST00000443009 864 ntBASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC38A1Q9H2H9 AC133637.1-201ENST00000624115 1537 ntBASIC20.27■□□□□ 0.83
SLC38A1Q9H2H9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 pRNA.6-201ENST00000610482 90 ntBASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 pRNA.5-201ENST00000612139 90 ntBASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 pRNA.11-201ENST00000618423 90 ntBASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 pRNA.13-201ENST00000619112 90 ntBASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SLC38A1Q9H2H9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC38A1Q9H2H9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms