Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPENQ96T58 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SPENQ96T58 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20■□□□□ 0.79
SPENQ96T58 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SPENQ96T58 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPENQ96T58 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20■□□□□ 0.79
SPENQ96T58 CD99P1-205ENST00000527459 561 ntBASIC20■□□□□ 0.79
SPENQ96T58 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20■□□□□ 0.79
SPENQ96T58 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPENQ96T58 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SPENQ96T58 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.99■□□□□ 0.79
SPENQ96T58 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.99■□□□□ 0.79
SPENQ96T58 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.99■□□□□ 0.79
SPENQ96T58 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.99■□□□□ 0.79
SPENQ96T58 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPENQ96T58 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.99■□□□□ 0.79
SPENQ96T58 AC008687.6-201ENST00000596318 630 ntBASIC19.99■□□□□ 0.79
SPENQ96T58 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPENQ96T58 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPENQ96T58 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.98■□□□□ 0.79
SPENQ96T58 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.98■□□□□ 0.79
SPENQ96T58 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.98■□□□□ 0.79
SPENQ96T58 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.98■□□□□ 0.79
SPENQ96T58 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPENQ96T58 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.98■□□□□ 0.79
SPENQ96T58 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.97■□□□□ 0.79
SPENQ96T58 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.97■□□□□ 0.79
SPENQ96T58 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.97■□□□□ 0.79
SPENQ96T58 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.97■□□□□ 0.79
SPENQ96T58 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 AC020928.2-201ENST00000588717 2197 ntBASIC19.97■□□□□ 0.79
SPENQ96T58 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPENQ96T58 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SPENQ96T58 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.97■□□□□ 0.79
SPENQ96T58 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SPENQ96T58 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.96■□□□□ 0.79
SPENQ96T58 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.96■□□□□ 0.79
SPENQ96T58 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPENQ96T58 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.96■□□□□ 0.79
SPENQ96T58 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
SPENQ96T58 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPENQ96T58 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPENQ96T58 GPX1P1-201ENST00000388829 606 ntBASIC19.95■□□□□ 0.78
SPENQ96T58 DUSP8P5-201ENST00000422884 1815 ntBASIC19.95■□□□□ 0.78
SPENQ96T58 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPENQ96T58 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPENQ96T58 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.95■□□□□ 0.78
SPENQ96T58 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
SPENQ96T58 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPENQ96T58 AL353803.4-201ENST00000565882 1934 ntBASIC19.95■□□□□ 0.78
SPENQ96T58 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.95■□□□□ 0.78
SPENQ96T58 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.95■□□□□ 0.78
SPENQ96T58 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SPENQ96T58 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.95■□□□□ 0.78
SPENQ96T58 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPENQ96T58 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 DUX4L4-201ENST00000566884 1269 ntBASIC19.94■□□□□ 0.78
SPENQ96T58 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SPENQ96T58 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPENQ96T58 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 AC093827.2-201ENST00000512654 315 ntBASIC19.94■□□□□ 0.78
SPENQ96T58 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.94■□□□□ 0.78
SPENQ96T58 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPENQ96T58 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.93■□□□□ 0.78
SPENQ96T58 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPENQ96T58 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 KRT19P1-201ENST00000405746 1186 ntBASIC19.93■□□□□ 0.78
SPENQ96T58 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.93■□□□□ 0.78
SPENQ96T58 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.93■□□□□ 0.78
SPENQ96T58 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.93■□□□□ 0.78
SPENQ96T58 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPENQ96T58 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.93■□□□□ 0.78
SPENQ96T58 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPENQ96T58 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms