Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNTNAP3BQ96NU0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 AL445228.2-201ENST00000605589 952 ntBASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21■□□□□ 0.95
CNTNAP3BQ96NU0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
CNTNAP3BQ96NU0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 LINC01003-201ENST00000564834 1764 ntBASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 OR2I1P-207ENST00000453522 948 ntBASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.98■□□□□ 0.95
CNTNAP3BQ96NU0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 UNC93B5-201ENST00000530315 699 ntBASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 FP325331.1-202ENST00000623531 1380 ntBASIC20.97■□□□□ 0.95
CNTNAP3BQ96NU0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 MIR718-201ENST00000390190 70 ntBASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 MIPEPP3-201ENST00000412105 444 ntBASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 UBE2SP1-201ENST00000450587 669 ntBASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP3BQ96NU0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP3BQ96NU0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP3BQ96NU0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms