Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLPTM1LQ96KA5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CLPTM1LQ96KA5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CLPTM1LQ96KA5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.01■□□□□ 0.95
CLPTM1LQ96KA5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 RNF165-205ENST00000588679 2904 ntBASIC21■□□□□ 0.95
CLPTM1LQ96KA5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLPTM1LQ96KA5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 AC018755.3-202ENST00000596210 929 ntBASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CLPTM1LQ96KA5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
CLPTM1LQ96KA5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 AC011551.1-201ENST00000614101 683 ntBASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1LQ96KA5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1LQ96KA5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 LINC01521-201ENST00000504184 1943 ntBASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 Z98882.1-201ENST00000622160 2253 ntBASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.95■□□□□ 0.94
CLPTM1LQ96KA5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
CLPTM1LQ96KA5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms