Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.89■■□□□ 1.42
LRCH3Q96II8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
LRCH3Q96II8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LRCH3Q96II8 AC133552.2-202ENST00000575694 574 ntBASIC23.89■■□□□ 1.41
LRCH3Q96II8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
LRCH3Q96II8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LRCH3Q96II8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LRCH3Q96II8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRCH3Q96II8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRCH3Q96II8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.88■■□□□ 1.41
LRCH3Q96II8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LRCH3Q96II8 AC079140.4-201ENST00000507448 529 ntBASIC23.88■■□□□ 1.41
LRCH3Q96II8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.88■■□□□ 1.41
LRCH3Q96II8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.88■■□□□ 1.41
LRCH3Q96II8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRCH3Q96II8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRCH3Q96II8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 UBE2DNL-204ENST00000602536 740 ntBASIC23.87■■□□□ 1.41
LRCH3Q96II8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
LRCH3Q96II8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRCH3Q96II8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRCH3Q96II8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
LRCH3Q96II8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRCH3Q96II8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRCH3Q96II8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH3Q96II8 AC020928.2-201ENST00000588717 2197 ntBASIC23.85■■□□□ 1.41
LRCH3Q96II8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH3Q96II8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH3Q96II8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRCH3Q96II8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.85■■□□□ 1.41
LRCH3Q96II8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.84■■□□□ 1.41
LRCH3Q96II8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 AC006058.3-201ENST00000606217 1069 ntBASIC23.84■■□□□ 1.41
LRCH3Q96II8 AC073912.3-201ENST00000624414 853 ntBASIC23.84■■□□□ 1.41
LRCH3Q96II8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRCH3Q96II8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRCH3Q96II8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
LRCH3Q96II8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 AC211429.1-201ENST00000415277 523 ntBASIC23.83■■□□□ 1.41
LRCH3Q96II8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 AC128676.1-201ENST00000454392 318 ntBASIC23.83■■□□□ 1.41
LRCH3Q96II8 AC008550.1-201ENST00000511500 884 ntBASIC23.83■■□□□ 1.41
LRCH3Q96II8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LRCH3Q96II8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRCH3Q96II8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LRCH3Q96II8 AC145676.1-201ENST00000514988 2004 ntBASIC23.83■■□□□ 1.4
LRCH3Q96II8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.82■■□□□ 1.4
LRCH3Q96II8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.82■■□□□ 1.4
LRCH3Q96II8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms