Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX11Q96FC9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX11Q96FC9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX11Q96FC9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
DDX11Q96FC9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX11Q96FC9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX11Q96FC9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.92■■□□□ 1.74
DDX11Q96FC9 LINC01529-204ENST00000636474 1715 ntBASIC25.92■■□□□ 1.74
DDX11Q96FC9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
DDX11Q96FC9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX11Q96FC9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.92■■□□□ 1.74
DDX11Q96FC9 MIR6821-201ENST00000617625 74 ntBASIC25.92■■□□□ 1.74
DDX11Q96FC9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX11Q96FC9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX11Q96FC9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX11Q96FC9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX11Q96FC9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX11Q96FC9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 IRS3P-201ENST00000223076 1006 ntBASIC25.91■■□□□ 1.74
DDX11Q96FC9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX11Q96FC9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 AC104564.3-201ENST00000582367 638 ntBASIC25.91■■□□□ 1.74
DDX11Q96FC9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
DDX11Q96FC9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX11Q96FC9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.9■■□□□ 1.74
DDX11Q96FC9 AC233992.3-201ENST00000607491 485 ntBASIC25.9■■□□□ 1.74
DDX11Q96FC9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX11Q96FC9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.9■■□□□ 1.74
DDX11Q96FC9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX11Q96FC9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX11Q96FC9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX11Q96FC9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX11Q96FC9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX11Q96FC9 AC097381.1-201ENST00000429019 1296 ntBASIC25.89■■□□□ 1.74
DDX11Q96FC9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX11Q96FC9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX11Q96FC9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX11Q96FC9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX11Q96FC9 GUSBP5-202ENST00000510805 1989 ntBASIC25.88■■□□□ 1.73
DDX11Q96FC9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX11Q96FC9 BX842568.3-201ENST00000418104 571 ntBASIC25.88■■□□□ 1.73
DDX11Q96FC9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
DDX11Q96FC9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX11Q96FC9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX11Q96FC9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
DDX11Q96FC9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX11Q96FC9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX11Q96FC9 AC079834.2-201ENST00000609776 1949 ntBASIC25.87■■□□□ 1.73
DDX11Q96FC9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX11Q96FC9 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.87■■□□□ 1.73
DDX11Q96FC9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX11Q96FC9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX11Q96FC9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX11Q96FC9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX11Q96FC9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX11Q96FC9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 FP325331.1-202ENST00000623531 1380 ntBASIC25.86■■□□□ 1.73
DDX11Q96FC9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX11Q96FC9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX11Q96FC9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 pRNA.6-201ENST00000610482 90 ntBASIC25.86■■□□□ 1.73
DDX11Q96FC9 pRNA.5-201ENST00000612139 90 ntBASIC25.86■■□□□ 1.73
DDX11Q96FC9 pRNA.11-201ENST00000618423 90 ntBASIC25.86■■□□□ 1.73
DDX11Q96FC9 pRNA.13-201ENST00000619112 90 ntBASIC25.86■■□□□ 1.73
DDX11Q96FC9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX11Q96FC9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX11Q96FC9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX11Q96FC9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.86■■□□□ 1.73
DDX11Q96FC9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
DDX11Q96FC9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
DDX11Q96FC9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX11Q96FC9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms