Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 LINC01960-201ENST00000563759 1884 ntBASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
SLCO4A1Q96BD0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 Z98882.1-201ENST00000622160 2253 ntBASIC20.52■□□□□ 0.88
SLCO4A1Q96BD0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SLCO4A1Q96BD0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.87
SLCO4A1Q96BD0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLCO4A1Q96BD0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 ABHD17AP5-201ENST00000580133 923 ntBASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLCO4A1Q96BD0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLCO4A1Q96BD0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLCO4A1Q96BD0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 LINC01521-201ENST00000504184 1943 ntBASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.47■□□□□ 0.87
SLCO4A1Q96BD0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.46■□□□□ 0.87
SLCO4A1Q96BD0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms