Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS33AQ96AX1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 YBX1P4-201ENST00000392794 808 ntBASIC20.98■□□□□ 0.95
VPS33AQ96AX1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS33AQ96AX1 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
VPS33AQ96AX1 AC005703.6-201ENST00000623265 1329 ntBASIC20.98■□□□□ 0.95
VPS33AQ96AX1 FP325331.1-202ENST00000623531 1380 ntBASIC20.97■□□□□ 0.95
VPS33AQ96AX1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS33AQ96AX1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 AC026310.3-201ENST00000625186 2373 ntBASIC20.96■□□□□ 0.95
VPS33AQ96AX1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS33AQ96AX1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS33AQ96AX1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
VPS33AQ96AX1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 FAM99A-202ENST00000538190 1989 ntBASIC20.94■□□□□ 0.94
VPS33AQ96AX1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 MIR6722-201ENST00000617286 78 ntBASIC20.94■□□□□ 0.94
VPS33AQ96AX1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS33AQ96AX1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 AL031848.2-201ENST00000607670 837 ntBASIC20.93■□□□□ 0.94
VPS33AQ96AX1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS33AQ96AX1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms