Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
MBD3L1Q8WWY6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L1Q8WWY6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L1Q8WWY6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 MIR3648-2-201ENST00000581792 180 ntBASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 MIR3648-1-201ENST00000615959 180 ntBASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MBD3L1Q8WWY6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MBD3L1Q8WWY6 AC144652.1-201ENST00000609974 1624 ntBASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L1Q8WWY6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 AF106564.1-201ENST00000607058 2553 ntBASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L1Q8WWY6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
MBD3L1Q8WWY6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms