Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.09■■□□□ 1.13
HMGB4Q8WW32 AC010141.3-201ENST00000456659 717 ntBASIC22.09■■□□□ 1.13
HMGB4Q8WW32 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
HMGB4Q8WW32 AC004812.2-201ENST00000611079 2094 ntBASIC22.09■■□□□ 1.13
HMGB4Q8WW32 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGB4Q8WW32 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
HMGB4Q8WW32 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HMGB4Q8WW32 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HMGB4Q8WW32 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.08■■□□□ 1.13
HMGB4Q8WW32 SMUG1P1-201ENST00000590640 811 ntBASIC22.08■■□□□ 1.13
HMGB4Q8WW32 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.08■■□□□ 1.13
HMGB4Q8WW32 AC073111.5-205ENST00000641717 521 ntBASIC22.08■■□□□ 1.13
HMGB4Q8WW32 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
HMGB4Q8WW32 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HMGB4Q8WW32 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HMGB4Q8WW32 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 CDCA4P2-201ENST00000441182 718 ntBASIC22.07■■□□□ 1.12
HMGB4Q8WW32 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGB4Q8WW32 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.06■■□□□ 1.12
HMGB4Q8WW32 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGB4Q8WW32 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 RAP2CP1-201ENST00000605103 478 ntBASIC22.05■■□□□ 1.12
HMGB4Q8WW32 BID-214ENST00000617586 542 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGB4Q8WW32 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 KRT19P1-201ENST00000405746 1186 ntBASIC22.04■■□□□ 1.12
HMGB4Q8WW32 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGB4Q8WW32 ABCB10P4-201ENST00000566803 2184 ntBASIC22.04■■□□□ 1.12
HMGB4Q8WW32 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGB4Q8WW32 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 AC026185.1-201ENST00000445748 174 ntBASIC22.02■■□□□ 1.12
HMGB4Q8WW32 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGB4Q8WW32 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGB4Q8WW32 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGB4Q8WW32 AC079140.4-201ENST00000507448 529 ntBASIC22■■□□□ 1.11
HMGB4Q8WW32 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22■■□□□ 1.11
HMGB4Q8WW32 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22■■□□□ 1.11
HMGB4Q8WW32 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGB4Q8WW32 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms