Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 AC137767.1-201ENST00000602918 1920 ntBASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 AC008406.3-201ENST00000620001 1374 ntBASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCFD1Q8WVM8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.46
SCFD1Q8WVM8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SCFD1Q8WVM8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SCFD1Q8WVM8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SCFD1Q8WVM8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 CA15P2-201ENST00000611168 834 ntBASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 AC011298.3-201ENST00000615796 283 ntBASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 AC136469.2-201ENST00000623944 1028 ntBASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SCFD1Q8WVM8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 AC010525.1-201ENST00000585559 441 ntBASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 LINC00526-201ENST00000581067 1875 ntBASIC24.13■■□□□ 1.45
SCFD1Q8WVM8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 UNC93B3-201ENST00000308076 687 ntBASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCFD1Q8WVM8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
SCFD1Q8WVM8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCFD1Q8WVM8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCFD1Q8WVM8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SCFD1Q8WVM8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms