Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC004854.2-201ENST00000608450 1441 ntBASIC20.56■□□□□ 0.88
CT55Q8WUE5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 AC016769.1-201ENST00000409132 1010 ntBASIC20.56■□□□□ 0.88
CT55Q8WUE5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CT55Q8WUE5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CT55Q8WUE5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CT55Q8WUE5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CT55Q8WUE5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CT55Q8WUE5 AP004607.4-201ENST00000530158 1459 ntBASIC20.56■□□□□ 0.88
CT55Q8WUE5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CT55Q8WUE5 ID1-201ENST00000376105 1233 ntBASIC20.55■□□□□ 0.88
CT55Q8WUE5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.55■□□□□ 0.88
CT55Q8WUE5 AC006015.1-201ENST00000429970 570 ntBASIC20.55■□□□□ 0.88
CT55Q8WUE5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CT55Q8WUE5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CT55Q8WUE5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.55■□□□□ 0.88
CT55Q8WUE5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CT55Q8WUE5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.54■□□□□ 0.88
CT55Q8WUE5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 AC080038.1-201ENST00000611274 1154 ntBASIC20.54■□□□□ 0.88
CT55Q8WUE5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CT55Q8WUE5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CT55Q8WUE5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
CT55Q8WUE5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CT55Q8WUE5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CT55Q8WUE5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CT55Q8WUE5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CT55Q8WUE5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CT55Q8WUE5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
CT55Q8WUE5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CT55Q8WUE5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CT55Q8WUE5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CT55Q8WUE5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CT55Q8WUE5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CT55Q8WUE5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.5■□□□□ 0.87
CT55Q8WUE5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CT55Q8WUE5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CT55Q8WUE5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CT55Q8WUE5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CT55Q8WUE5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CT55Q8WUE5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.49■□□□□ 0.87
CT55Q8WUE5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CT55Q8WUE5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
CT55Q8WUE5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CT55Q8WUE5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CT55Q8WUE5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CT55Q8WUE5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms