Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SMARCC2Q8TAQ2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SMARCC2Q8TAQ2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 AL499627.2-201ENST00000606283 725 ntBASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC2Q8TAQ2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 AL138724.1-201ENST00000606771 1088 ntBASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SMARCC2Q8TAQ2 AC004687.1-201ENST00000579003 1625 ntBASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 LINC00565-201ENST00000562710 2331 ntBASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC2Q8TAQ2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 MIR3181-201ENST00000578512 73 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 pRNA.6-201ENST00000610482 90 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 pRNA.5-201ENST00000612139 90 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 AC011298.3-201ENST00000615796 283 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 pRNA.11-201ENST00000618423 90 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 pRNA.13-201ENST00000619112 90 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 LINC01960-201ENST00000563759 1884 ntBASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC2Q8TAQ2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 MIR4767-201ENST00000582827 78 ntBASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC2Q8TAQ2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC2Q8TAQ2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC2Q8TAQ2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC2Q8TAQ2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC2Q8TAQ2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC2Q8TAQ2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 EDA-201ENST00000338901 1233 ntBASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.63■■□□□ 1.69
SMARCC2Q8TAQ2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms