Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 AC005229.4-201ENST00000610085 2198 ntBASIC21.17■□□□□ 0.98
HIPK4Q8NE63 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HIPK4Q8NE63 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 FAM99A-202ENST00000538190 1989 ntBASIC21.16■□□□□ 0.98
HIPK4Q8NE63 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 DUX4L18-201ENST00000553347 1267 ntBASIC21.16■□□□□ 0.98
HIPK4Q8NE63 ABHD17AP5-201ENST00000580133 923 ntBASIC21.16■□□□□ 0.98
HIPK4Q8NE63 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.16■□□□□ 0.98
HIPK4Q8NE63 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HIPK4Q8NE63 NTF6A-201ENST00000591175 560 ntBASIC21.15■□□□□ 0.98
HIPK4Q8NE63 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIPK4Q8NE63 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
HIPK4Q8NE63 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK4Q8NE63 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK4Q8NE63 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK4Q8NE63 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK4Q8NE63 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK4Q8NE63 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIPK4Q8NE63 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
HIPK4Q8NE63 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 AC120024.1-201ENST00000562672 995 ntBASIC21.12■□□□□ 0.97
HIPK4Q8NE63 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIPK4Q8NE63 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK4Q8NE63 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK4Q8NE63 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
HIPK4Q8NE63 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms