Protein–RNA interactions for Protein: Q8ND61

C3orf20, Uncharacterized protein C3orf20, humanhuman

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf20Q8ND61 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.22■■□□□ 1.31
C3orf20Q8ND61 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
C3orf20Q8ND61 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 MIR4466-201ENST00000606121 54 ntBASIC23.2■■□□□ 1.3
C3orf20Q8ND61 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
C3orf20Q8ND61 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.19■■□□□ 1.3
C3orf20Q8ND61 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 AC131281.2-201ENST00000520478 145 ntBASIC23.19■■□□□ 1.3
C3orf20Q8ND61 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C3orf20Q8ND61 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
C3orf20Q8ND61 LINC01960-201ENST00000563759 1884 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 AC092171.4-201ENST00000609130 632 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.18■■□□□ 1.3
C3orf20Q8ND61 pRNA.6-201ENST00000610482 90 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 pRNA.5-201ENST00000612139 90 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 pRNA.11-201ENST00000618423 90 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 pRNA.13-201ENST00000619112 90 ntBASIC23.18■■□□□ 1.3
C3orf20Q8ND61 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
C3orf20Q8ND61 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.18■■□□□ 1.3
C3orf20Q8ND61 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
C3orf20Q8ND61 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 AC133637.1-201ENST00000624115 1537 ntBASIC23.17■■□□□ 1.3
C3orf20Q8ND61 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
C3orf20Q8ND61 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf20Q8ND61 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 AC007375.3-201ENST00000600936 2314 ntBASIC23.15■■□□□ 1.3
C3orf20Q8ND61 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf20Q8ND61 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
C3orf20Q8ND61 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.14■■□□□ 1.3
C3orf20Q8ND61 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.14■■□□□ 1.3
C3orf20Q8ND61 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
C3orf20Q8ND61 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.14■■□□□ 1.29
C3orf20Q8ND61 MIR3181-201ENST00000578512 73 ntBASIC23.14■■□□□ 1.29
C3orf20Q8ND61 AC242852.2-201ENST00000615738 1807 ntBASIC23.14■■□□□ 1.29
C3orf20Q8ND61 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
C3orf20Q8ND61 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
C3orf20Q8ND61 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.13■■□□□ 1.29
C3orf20Q8ND61 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
C3orf20Q8ND61 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms