Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 MIR572-201ENST00000384983 95 ntBASIC24.81■■□□□ 1.56
RETREG2Q8NC44 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RETREG2Q8NC44 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 AC144652.1-201ENST00000609974 1624 ntBASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RETREG2Q8NC44 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 DUX4L4-201ENST00000566884 1269 ntBASIC24.79■■□□□ 1.56
RETREG2Q8NC44 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 AL354811.1-201ENST00000610286 706 ntBASIC24.79■■□□□ 1.56
RETREG2Q8NC44 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.79■■□□□ 1.56
RETREG2Q8NC44 MIR6084-201ENST00000622012 110 ntBASIC24.79■■□□□ 1.56
RETREG2Q8NC44 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 LINC01529-204ENST00000636474 1715 ntBASIC24.78■■□□□ 1.56
RETREG2Q8NC44 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
RETREG2Q8NC44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.77■■□□□ 1.56
RETREG2Q8NC44 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 AC012414.1-201ENST00000556676 535 ntBASIC24.77■■□□□ 1.56
RETREG2Q8NC44 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 AL499627.2-201ENST00000606283 725 ntBASIC24.77■■□□□ 1.56
RETREG2Q8NC44 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RETREG2Q8NC44 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 AC092437.1-201ENST00000624794 1048 ntBASIC24.76■■□□□ 1.55
RETREG2Q8NC44 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.76■■□□□ 1.55
RETREG2Q8NC44 AC133637.1-201ENST00000624115 1537 ntBASIC24.76■■□□□ 1.55
RETREG2Q8NC44 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 AC004911.1-201ENST00000416316 871 ntBASIC24.75■■□□□ 1.55
RETREG2Q8NC44 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RETREG2Q8NC44 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.74■■□□□ 1.55
RETREG2Q8NC44 AL117328.2-201ENST00000624617 1940 ntBASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms