Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 AC092053.2-201ENST00000640557 1818 ntBASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSMEM1Q8N8F7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 CA15P2-201ENST00000611168 834 ntBASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSMEM1Q8N8F7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LSMEM1Q8N8F7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.02■□□□□ 0.79
LSMEM1Q8N8F7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LSMEM1Q8N8F7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 LINC00565-201ENST00000562710 2331 ntBASIC20.01■□□□□ 0.79
LSMEM1Q8N8F7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 AC137767.1-201ENST00000602918 1920 ntBASIC20■□□□□ 0.79
LSMEM1Q8N8F7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSMEM1Q8N8F7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 AL356441.2-201ENST00000443009 864 ntBASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 AL512631.2-201ENST00000604634 923 ntBASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 AC099791.2-201ENST00000605725 427 ntBASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSMEM1Q8N8F7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 AC133637.1-201ENST00000624115 1537 ntBASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 AC006455.2-201ENST00000429931 906 ntBASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 AC092171.4-201ENST00000609130 632 ntBASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSMEM1Q8N8F7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms