Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRAM1L1Q8N609 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRAM1L1Q8N609 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAM1L1Q8N609 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAM1L1Q8N609 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAM1L1Q8N609 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAM1L1Q8N609 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAM1L1Q8N609 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 AC087742.1-201ENST00000575880 1738 ntBASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAM1L1Q8N609 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 ZNRF2P3-201ENST00000424200 374 ntBASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAM1L1Q8N609 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 ESRRAP2-201ENST00000418437 1549 ntBASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 OXCT2P1-201ENST00000447263 1535 ntBASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 C1orf229-201ENST00000623686 2258 ntBASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 IRS3P-201ENST00000223076 1006 ntBASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAM1L1Q8N609 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 MIR572-201ENST00000384983 95 ntBASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAM1L1Q8N609 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAM1L1Q8N609 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.63■■□□□ 1.05
TRAM1L1Q8N609 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAM1L1Q8N609 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.63■■□□□ 1.05
TRAM1L1Q8N609 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRAM1L1Q8N609 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAM1L1Q8N609 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAM1L1Q8N609 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.62■■□□□ 1.05
TRAM1L1Q8N609 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRAM1L1Q8N609 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms