Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.29■□□□□ 0.84
C9orf40Q8IXQ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 C1orf229-201ENST00000623686 2258 ntBASIC20.28■□□□□ 0.84
C9orf40Q8IXQ3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf40Q8IXQ3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
C9orf40Q8IXQ3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.27■□□□□ 0.83
C9orf40Q8IXQ3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 AC010141.3-201ENST00000456659 717 ntBASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 AC087742.1-201ENST00000575880 1738 ntBASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf40Q8IXQ3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 AC087239.1-201ENST00000622671 572 ntBASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf40Q8IXQ3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C9orf40Q8IXQ3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 IRS3P-201ENST00000223076 1006 ntBASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
C9orf40Q8IXQ3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 MIR572-201ENST00000384983 95 ntBASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
C9orf40Q8IXQ3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.21■□□□□ 0.83
C9orf40Q8IXQ3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms