Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 AC139530.1-201ENST00000575312 1977 ntBASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 MIR3181-201ENST00000578512 73 ntBASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 MIR4466-201ENST00000606121 54 ntBASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 CA15P2-201ENST00000611168 834 ntBASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 EP400NL-214ENST00000641289 2402 ntBASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 AC092171.4-201ENST00000609130 632 ntBASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST2H3AQ71DI3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST2H3AQ71DI3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 AC131281.2-201ENST00000520478 145 ntBASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST2H3AQ71DI3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 AL031602.1-201ENST00000633169 911 ntBASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HIST2H3AQ71DI3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 AC137767.1-201ENST00000602918 1920 ntBASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST2H3AQ71DI3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.15■□□□□ 0.66
HIST2H3AQ71DI3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms