Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAPH1Q70E73 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAPH1Q70E73 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAPH1Q70E73 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.93■■□□□ 1.1
RAPH1Q70E73 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.93■■□□□ 1.1
RAPH1Q70E73 MTDHP2-201ENST00000601468 714 ntBASIC21.93■■□□□ 1.1
RAPH1Q70E73 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAPH1Q70E73 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPH1Q70E73 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.92■■□□□ 1.1
RAPH1Q70E73 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.92■■□□□ 1.1
RAPH1Q70E73 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.92■■□□□ 1.1
RAPH1Q70E73 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAPH1Q70E73 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 Z92544.1-202ENST00000571933 1220 ntBASIC21.91■■□□□ 1.1
RAPH1Q70E73 AC009086.3-201ENST00000623486 1008 ntBASIC21.91■■□□□ 1.1
RAPH1Q70E73 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
RAPH1Q70E73 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAPH1Q70E73 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 MIR4787-201ENST00000607364 84 ntBASIC21.9■■□□□ 1.1
RAPH1Q70E73 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RAPH1Q70E73 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPH1Q70E73 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAPH1Q70E73 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPH1Q70E73 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPH1Q70E73 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPH1Q70E73 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPH1Q70E73 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPH1Q70E73 DUX4L4-201ENST00000566884 1269 ntBASIC21.89■■□□□ 1.09
RAPH1Q70E73 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.89■■□□□ 1.09
RAPH1Q70E73 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPH1Q70E73 C11orf96-202ENST00000528572 1834 ntBASIC21.89■■□□□ 1.09
RAPH1Q70E73 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPH1Q70E73 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RAPH1Q70E73 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAPH1Q70E73 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.88■■□□□ 1.09
RAPH1Q70E73 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.88■■□□□ 1.09
RAPH1Q70E73 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPH1Q70E73 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPH1Q70E73 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 AC239859.2-201ENST00000444165 318 ntBASIC21.87■■□□□ 1.09
RAPH1Q70E73 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 LINC01960-201ENST00000563759 1884 ntBASIC21.87■■□□□ 1.09
RAPH1Q70E73 AC009102.2-201ENST00000606772 1639 ntBASIC21.87■■□□□ 1.09
RAPH1Q70E73 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPH1Q70E73 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RAPH1Q70E73 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAPH1Q70E73 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.86■■□□□ 1.09
RAPH1Q70E73 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.86■■□□□ 1.09
RAPH1Q70E73 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RAPH1Q70E73 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAPH1Q70E73 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
RAPH1Q70E73 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.86■■□□□ 1.09
RAPH1Q70E73 TSPY9P-201ENST00000440215 945 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms