Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 AL031602.1-201ENST00000633169 911 ntBASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DENND1BQ6P3S1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
DENND1BQ6P3S1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 AC106739.1-201ENST00000617035 715 ntBASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 AC127496.7-201ENST00000625110 1798 ntBASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DENND1BQ6P3S1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 GUSBP5-202ENST00000510805 1989 ntBASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DENND1BQ6P3S1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 AC080038.3-201ENST00000623346 1952 ntBASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DENND1BQ6P3S1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DENND1BQ6P3S1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DENND1BQ6P3S1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 AL139246.5-201ENST00000606645 996 ntBASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 CA15P2-201ENST00000611168 834 ntBASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 AC137767.1-201ENST00000602918 1920 ntBASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 AL117328.2-201ENST00000624617 1940 ntBASIC23.16■■□□□ 1.3
DENND1BQ6P3S1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
DENND1BQ6P3S1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms