Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 MIR4758-201ENST00000577688 71 ntBASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.9■■□□□ 1.26
PTCRAQ6ISU1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCRAQ6ISU1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PTCRAQ6ISU1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
PTCRAQ6ISU1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCRAQ6ISU1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PTCRAQ6ISU1 MYCNOS-205ENST00000641950 531 ntBASIC22.89■■□□□ 1.25
PTCRAQ6ISU1 KRT87P-202ENST00000534226 1464 ntBASIC22.89■■□□□ 1.25
PTCRAQ6ISU1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.88■■□□□ 1.25
PTCRAQ6ISU1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 DUSP5P2-201ENST00000426873 1033 ntBASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 AC010141.3-201ENST00000456659 717 ntBASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 AC098590.1-201ENST00000468126 897 ntBASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCRAQ6ISU1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 CNN2P6-201ENST00000439038 900 ntBASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PTCRAQ6ISU1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCRAQ6ISU1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 SLC7A5P1-201ENST00000568957 537 ntBASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCRAQ6ISU1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 AL596275.1-201ENST00000423464 877 ntBASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCRAQ6ISU1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
PTCRAQ6ISU1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
PTCRAQ6ISU1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 GCSHP5-201ENST00000443090 522 ntBASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms