Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 LINC01960-201ENST00000563759 1884 ntBASIC24.91■■□□□ 1.58
PPP4R3AQ6IN85 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3AQ6IN85 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3AQ6IN85 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3AQ6IN85 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 C1orf229-201ENST00000623686 2258 ntBASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 AP005435.1-201ENST00000529293 1178 ntBASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 AF213884.3-201ENST00000563833 479 ntBASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3AQ6IN85 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 AC091305.1-201ENST00000479476 895 ntBASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 AC008764.7-201ENST00000593779 1081 ntBASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3AQ6IN85 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
PPP4R3AQ6IN85 AC087742.1-201ENST00000575880 1738 ntBASIC24.89■■□□□ 1.57
PPP4R3AQ6IN85 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
PPP4R3AQ6IN85 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3AQ6IN85 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3AQ6IN85 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 AC099791.1-201ENST00000416440 715 ntBASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 RASA4CP-201ENST00000424092 1398 ntBASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3AQ6IN85 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3AQ6IN85 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 ESRRAP2-201ENST00000418437 1549 ntBASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3AQ6IN85 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 AC133561.1-201ENST00000568600 2415 ntBASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 AC142381.2-201ENST00000566120 298 ntBASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PPP4R3AQ6IN85 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 CA15P2-201ENST00000611168 834 ntBASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 AC012676.1-201ENST00000574705 1949 ntBASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.84■■□□□ 1.57
PPP4R3AQ6IN85 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.83■■□□□ 1.57
PPP4R3AQ6IN85 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PPP4R3AQ6IN85 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.56
PPP4R3AQ6IN85 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 AC126544.1-201ENST00000580842 1059 ntBASIC24.82■■□□□ 1.56
PPP4R3AQ6IN85 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms