Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 MIR3181-201ENST00000578512 73 ntBASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HIST2H2AA3Q6FI13 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST2H2AA3Q6FI13 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 AC087742.1-201ENST00000575880 1738 ntBASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2AA3Q6FI13 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 AL136116.3-201ENST00000402907 1138 ntBASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 AL138724.1-201ENST00000606771 1088 ntBASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
HIST2H2AA3Q6FI13 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 AC242852.2-201ENST00000615738 1807 ntBASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2AA3Q6FI13 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.09■□□□□ 0.97
HIST2H2AA3Q6FI13 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST2H2AA3Q6FI13 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST2H2AA3Q6FI13 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST2H2AA3Q6FI13 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
HIST2H2AA3Q6FI13 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST2H2AA3Q6FI13 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 ECEL1P1-201ENST00000373592 1742 ntBASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 SERBP1P1-201ENST00000396021 1160 ntBASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 AC008406.3-201ENST00000620001 1374 ntBASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HIST2H2AA3Q6FI13 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H2AA3Q6FI13 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H2AA3Q6FI13 AC079834.2-201ENST00000609776 1949 ntBASIC21.06■□□□□ 0.96
HIST2H2AA3Q6FI13 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms