Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 AC090192.1-201ENST00000517740 490 ntBASIC22.91■■□□□ 1.26
RNF43Q68DV7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF43Q68DV7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.91■■□□□ 1.26
RNF43Q68DV7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF43Q68DV7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF43Q68DV7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF43Q68DV7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RNF43Q68DV7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RNF43Q68DV7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF43Q68DV7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF43Q68DV7 AC233992.3-201ENST00000607491 485 ntBASIC22.9■■□□□ 1.26
RNF43Q68DV7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF43Q68DV7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF43Q68DV7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF43Q68DV7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF43Q68DV7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF43Q68DV7 AC133637.1-201ENST00000624115 1537 ntBASIC22.89■■□□□ 1.26
RNF43Q68DV7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF43Q68DV7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF43Q68DV7 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 RARRES2P11-201ENST00000635158 484 ntBASIC22.89■■□□□ 1.25
RNF43Q68DV7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF43Q68DV7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF43Q68DV7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
RNF43Q68DV7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.88■■□□□ 1.25
RNF43Q68DV7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 IRS3P-201ENST00000223076 1006 ntBASIC22.88■■□□□ 1.25
RNF43Q68DV7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.88■■□□□ 1.25
RNF43Q68DV7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.88■■□□□ 1.25
RNF43Q68DV7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF43Q68DV7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF43Q68DV7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RNF43Q68DV7 AC099791.1-201ENST00000416440 715 ntBASIC22.87■■□□□ 1.25
RNF43Q68DV7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RNF43Q68DV7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF43Q68DV7 LINC00526-201ENST00000581067 1875 ntBASIC22.87■■□□□ 1.25
RNF43Q68DV7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 AC079630.1-202ENST00000618127 1840 ntBASIC22.87■■□□□ 1.25
RNF43Q68DV7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF43Q68DV7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF43Q68DV7 AC137767.1-201ENST00000602918 1920 ntBASIC22.86■■□□□ 1.25
RNF43Q68DV7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.86■■□□□ 1.25
RNF43Q68DV7 AC008764.7-201ENST00000593779 1081 ntBASIC22.86■■□□□ 1.25
RNF43Q68DV7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF43Q68DV7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RNF43Q68DV7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF43Q68DV7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF43Q68DV7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.86■■□□□ 1.25
RNF43Q68DV7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF43Q68DV7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RNF43Q68DV7 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF43Q68DV7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF43Q68DV7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF43Q68DV7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF43Q68DV7 OR2I1P-207ENST00000453522 948 ntBASIC22.85■■□□□ 1.25
RNF43Q68DV7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF43Q68DV7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RNF43Q68DV7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF43Q68DV7 AC127496.7-201ENST00000625110 1798 ntBASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms