Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC11.94□□□□□ -0.5
RNF213Q63HN8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RNF213Q63HN8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RNF213Q63HN8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.94□□□□□ -0.5
RNF213Q63HN8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.94□□□□□ -0.5
RNF213Q63HN8 AC104187.1-201ENST00000607510 612 ntBASIC11.94□□□□□ -0.5
RNF213Q63HN8 AL121906.2-201ENST00000621597 723 ntBASIC11.94□□□□□ -0.5
RNF213Q63HN8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 AP004609.3-201ENST00000610705 1884 ntBASIC11.93□□□□□ -0.5
RNF213Q63HN8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 PRKY-204ENST00000533551 1019 ntBASIC11.93□□□□□ -0.5
RNF213Q63HN8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RNF213Q63HN8 AC096887.2-201ENST00000623443 1957 ntBASIC11.93□□□□□ -0.5
RNF213Q63HN8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC11.93□□□□□ -0.5
RNF213Q63HN8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC11.92□□□□□ -0.5
RNF213Q63HN8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RNF213Q63HN8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 AC055733.4-201ENST00000638462 1354 ntBASIC11.91□□□□□ -0.5
RNF213Q63HN8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RNF213Q63HN8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.91□□□□□ -0.5
RNF213Q63HN8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF213Q63HN8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RNF213Q63HN8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 RPPH1-201ENST00000516869 333 ntBASIC11.91□□□□□ -0.5
RNF213Q63HN8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RNF213Q63HN8 AP003097.1-201ENST00000530657 1135 ntBASIC11.91□□□□□ -0.5
RNF213Q63HN8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC11.91□□□□□ -0.5
RNF213Q63HN8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
RNF213Q63HN8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.9□□□□□ -0.5
RNF213Q63HN8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.9□□□□□ -0.5
RNF213Q63HN8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
RNF213Q63HN8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC11.9□□□□□ -0.5
RNF213Q63HN8 KRT126P-201ENST00000549467 1181 ntBASIC11.9□□□□□ -0.5
RNF213Q63HN8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RNF213Q63HN8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RNF213Q63HN8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms