Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 LINC02228-203ENST00000641970 1355 ntBASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13DQ5THJ4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13DQ5THJ4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS13DQ5THJ4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS13DQ5THJ4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.96□□□□□ -0.02
VPS13DQ5THJ4 AP003733.4-201ENST00000623785 1697 ntBASIC14.96□□□□□ -0.02
VPS13DQ5THJ4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 KRT87P-202ENST00000534226 1464 ntBASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS13DQ5THJ4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 DUX4L16-201ENST00000555130 1264 ntBASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13DQ5THJ4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 SMUG1P1-201ENST00000590640 811 ntBASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS13DQ5THJ4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 AC069152.1-201ENST00000438030 544 ntBASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS13DQ5THJ4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms