Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
LINC00242Q5T6M2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00242Q5T6M2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00242Q5T6M2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00242Q5T6M2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LINC00242Q5T6M2 FP325331.1-202ENST00000623531 1380 ntBASIC14.96□□□□□ -0.02
LINC00242Q5T6M2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC00242Q5T6M2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
LINC00242Q5T6M2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00242Q5T6M2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 AC074183.2-201ENST00000623112 922 ntBASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC00242Q5T6M2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 SNX5-217ENST00000606557 1087 ntBASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 AC005229.4-201ENST00000610085 2198 ntBASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00242Q5T6M2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 PVT1_1.1-201ENST00000615125 194 ntBASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 AC244015.2-201ENST00000616358 1861 ntBASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00242Q5T6M2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 AC009086.3-201ENST00000623486 1008 ntBASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC00242Q5T6M2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 SLC25A24-204ENST00000569674 2357 ntBASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC00242Q5T6M2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms