Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.33■□□□□ 0.69
LRRK2Q5S007 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.33■□□□□ 0.69
LRRK2Q5S007 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.33■□□□□ 0.69
LRRK2Q5S007 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRK2Q5S007 ALDH1A3-203ENST00000557963 1670 ntBASIC19.33■□□□□ 0.68
LRRK2Q5S007 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LRRK2Q5S007 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRK2Q5S007 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRK2Q5S007 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRK2Q5S007 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRK2Q5S007 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRK2Q5S007 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRK2Q5S007 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRK2Q5S007 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRK2Q5S007 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRK2Q5S007 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRK2Q5S007 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRK2Q5S007 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRK2Q5S007 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.32■□□□□ 0.68
LRRK2Q5S007 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRK2Q5S007 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRK2Q5S007 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRK2Q5S007 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRK2Q5S007 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRK2Q5S007 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRK2Q5S007 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 AC010536.3-201ENST00000620306 533 ntBASIC19.3■□□□□ 0.68
LRRK2Q5S007 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRK2Q5S007 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRRK2Q5S007 AL161729.1-201ENST00000604104 1402 ntBASIC19.3■□□□□ 0.68
LRRK2Q5S007 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 AC013268.1-206ENST00000638368 961 ntBASIC19.29■□□□□ 0.68
LRRK2Q5S007 AC112229.1-201ENST00000639295 961 ntBASIC19.29■□□□□ 0.68
LRRK2Q5S007 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.29■□□□□ 0.68
LRRK2Q5S007 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 MYC-209ENST00000641252 345 ntBASIC19.29■□□□□ 0.68
LRRK2Q5S007 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRK2Q5S007 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRK2Q5S007 FP325331.1-202ENST00000623531 1380 ntBASIC19.29■□□□□ 0.68
LRRK2Q5S007 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRK2Q5S007 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRK2Q5S007 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRK2Q5S007 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms