Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 FAM99A-202ENST00000538190 1989 ntBASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3AQ59EK9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
RUNDC3AQ59EK9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RUNDC3AQ59EK9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 CA15P2-201ENST00000611168 834 ntBASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RUNDC3AQ59EK9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RUNDC3AQ59EK9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RUNDC3AQ59EK9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
RUNDC3AQ59EK9 AC004687.1-201ENST00000579003 1625 ntBASIC20.64■□□□□ 0.9
RUNDC3AQ59EK9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 AC009102.2-201ENST00000606772 1639 ntBASIC20.64■□□□□ 0.89
RUNDC3AQ59EK9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.63■□□□□ 0.89
RUNDC3AQ59EK9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 BX664725.1-201ENST00000438252 379 ntBASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RUNDC3AQ59EK9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.61■□□□□ 0.89
RUNDC3AQ59EK9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms