Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 AC008764.7-201ENST00000593779 1081 ntBASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.02■□□□□ 0.64
TBC1D28Q2M2D7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D28Q2M2D7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D28Q2M2D7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TBC1D28Q2M2D7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TBC1D28Q2M2D7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 AP001330.3-201ENST00000520123 633 ntBASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 AF213884.3-201ENST00000563833 479 ntBASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 AC142381.2-201ENST00000566120 298 ntBASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 AC126544.1-201ENST00000580842 1059 ntBASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D28Q2M2D7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 MIR638-201ENST00000385237 100 ntBASIC19■□□□□ 0.63
TBC1D28Q2M2D7 AC099791.1-201ENST00000416440 715 ntBASIC19■□□□□ 0.63
TBC1D28Q2M2D7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TBC1D28Q2M2D7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 MIR939-201ENST00000401314 82 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 AC091305.1-201ENST00000479476 895 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 AP005435.1-201ENST00000529293 1178 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 AC005837.3-201ENST00000612163 286 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 AL031602.1-201ENST00000633169 911 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 C1orf229-201ENST00000623686 2258 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 ESRRAP2-201ENST00000418437 1549 ntBASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D28Q2M2D7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 AC068473.5-201ENST00000616428 2072 ntBASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D28Q2M2D7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 RASA4CP-201ENST00000424092 1398 ntBASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 AL031432.3-201ENST00000607698 485 ntBASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms