Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ESRRAP1-201ENST00000400596 1257 ntBASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 UNC93B4-201ENST00000505679 747 ntBASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RSPO4Q2I0M5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RSPO4Q2I0M5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 ALDH1A3-203ENST00000557963 1670 ntBASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RSPO4Q2I0M5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 MYCNOS-205ENST00000641950 531 ntBASIC21.41■■□□□ 1.02
RSPO4Q2I0M5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 AL161729.1-201ENST00000604104 1402 ntBASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 MIPEPP3-201ENST00000412105 444 ntBASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 CNN2P6-201ENST00000439038 900 ntBASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 AC006058.3-201ENST00000606217 1069 ntBASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RSPO4Q2I0M5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RSPO4Q2I0M5 FP325331.1-202ENST00000623531 1380 ntBASIC21.39■■□□□ 1.02
RSPO4Q2I0M5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RSPO4Q2I0M5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.39■■□□□ 1.01
RSPO4Q2I0M5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 MIR6089-201ENST00000616698 64 ntBASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.38■■□□□ 1.01
RSPO4Q2I0M5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 AC128676.1-201ENST00000454392 318 ntBASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
RSPO4Q2I0M5 AC008550.1-201ENST00000511500 884 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms