Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 PPT2YPL148C 522 nt5.67□□□□□ -1.5
MSH6Q03834 OXR1YPL196W 822 nt5.67□□□□□ -1.5
MSH6Q03834 RIB5YBR256C 717 nt5.67□□□□□ -1.5
MSH6Q03834 ABZ1YNR033W 2364 nt5.67□□□□□ -1.5
MSH6Q03834 DUR1,2YBR208C 5508 nt5.67□□□□□ -1.5
MSH6Q03834 FCF1YDR339C 570 nt5.66□□□□□ -1.5
MSH6Q03834 BUD25YER014C-A 462 nt5.66□□□□□ -1.5
MSH6Q03834 GLE2YER107C 1098 nt5.66□□□□□ -1.5
MSH6Q03834 YGR290WYGR290W 444 nt5.66□□□□□ -1.5
MSH6Q03834 YGR293CYGR293C 462 nt5.66□□□□□ -1.5
MSH6Q03834 IMP2YMR035W 534 nt5.66□□□□□ -1.5
MSH6Q03834 SEN15YMR059W 387 nt5.66□□□□□ -1.5
MSH6Q03834 TRM10YOL093W 882 nt5.66□□□□□ -1.5
MSH6Q03834 RIB4YOL143C 510 nt5.66□□□□□ -1.5
MSH6Q03834 YBR300CYBR300C 498 nt5.66□□□□□ -1.5
MSH6Q03834 ASF2YDL197C 1578 nt5.66□□□□□ -1.5
MSH6Q03834 TUP1YCR084C 2142 nt5.65□□□□□ -1.5
MSH6Q03834 ERD1YDR414C 1089 nt5.65□□□□□ -1.5
MSH6Q03834 MTC2YKL098W 1074 nt5.65□□□□□ -1.5
MSH6Q03834 YKL107WYKL107W 930 nt5.65□□□□□ -1.5
MSH6Q03834 YHC1YLR298C 696 nt5.65□□□□□ -1.5
MSH6Q03834 SSO2YMR183C 888 nt5.65□□□□□ -1.5
MSH6Q03834 PRX1YBL064C 786 nt5.65□□□□□ -1.5
MSH6Q03834 YPL205CYPL205C 345 nt5.65□□□□□ -1.5
MSH6Q03834 YPR195CYPR195C 330 nt5.65□□□□□ -1.5
MSH6Q03834 PDC1YLR044C 1692 nt5.65□□□□□ -1.51
MSH6Q03834 PPR1YLR014C 2715 nt5.65□□□□□ -1.51
MSH6Q03834 ATE1YGL017W 1512 nt5.64□□□□□ -1.51
MSH6Q03834 PDH1YPR002W 1551 nt5.64□□□□□ -1.51
MSH6Q03834 GZF3YJL110C 1656 nt5.64□□□□□ -1.51
MSH6Q03834 ERP3YDL018C 678 nt5.64□□□□□ -1.51
MSH6Q03834 GLO2YDR272W 825 nt5.64□□□□□ -1.51
MSH6Q03834 UPF3YGR072W 1164 nt5.64□□□□□ -1.51
MSH6Q03834 YIR023C-AYIR023C-A 324 nt5.64□□□□□ -1.51
MSH6Q03834 YJR141WYJR141W 1044 nt5.64□□□□□ -1.51
MSH6Q03834 THI11YJR156C 1023 nt5.64□□□□□ -1.51
MSH6Q03834 MET14YKL001C 609 nt5.64□□□□□ -1.51
MSH6Q03834 YKR041WYKR041W 753 nt5.64□□□□□ -1.51
MSH6Q03834 JLP1YLL057C 1239 nt5.64□□□□□ -1.51
MSH6Q03834 SPG4YMR107W 348 nt5.64□□□□□ -1.51
MSH6Q03834 HSH49YOR319W 642 nt5.64□□□□□ -1.51
MSH6Q03834 YCL002CYCL002C 792 nt5.64□□□□□ -1.51
MSH6Q03834 YLR446WYLR446W 1302 nt5.64□□□□□ -1.51
MSH6Q03834 STE20YHL007C 2820 nt5.64□□□□□ -1.51
MSH6Q03834 TDA6YPR157W 1404 nt5.64□□□□□ -1.51
MSH6Q03834 FOL1YNL256W 2475 nt5.64□□□□□ -1.51
MSH6Q03834 RPS16BYDL083C 432 nt5.63□□□□□ -1.51
MSH6Q03834 YDR053WYDR053W 396 nt5.63□□□□□ -1.51
MSH6Q03834 YDR118W-AYDR118W-A 117 nt5.63□□□□□ -1.51
MSH6Q03834 PGA3YML125C 939 nt5.63□□□□□ -1.51
MSH6Q03834 YOR366WYOR366W 354 nt5.63□□□□□ -1.51
MSH6Q03834 ECM33YBR078W 1290 nt5.63□□□□□ -1.51
MSH6Q03834 ATH1YPR026W 3636 nt5.62□□□□□ -1.51
MSH6Q03834 UBA2YDR390C 1911 nt5.62□□□□□ -1.51
MSH6Q03834 YCL076WYCL076W 744 nt5.62□□□□□ -1.51
MSH6Q03834 SLU7YDR088C 1149 nt5.62□□□□□ -1.51
MSH6Q03834 LRS4YDR439W 1044 nt5.62□□□□□ -1.51
MSH6Q03834 RPF1YHR088W 888 nt5.62□□□□□ -1.51
MSH6Q03834 ECI1YLR284C 843 nt5.62□□□□□ -1.51
MSH6Q03834 YMR130WYMR130W 909 nt5.62□□□□□ -1.51
MSH6Q03834 RRG8YPR116W 834 nt5.62□□□□□ -1.51
MSH6Q03834 CTS2YDR371W 1536 nt5.62□□□□□ -1.51
MSH6Q03834 HXT5YHR096C 1779 nt5.62□□□□□ -1.51
MSH6Q03834 YHR182WYHR182W 2358 nt5.62□□□□□ -1.51
MSH6Q03834 ADY2YCR010C 852 nt5.61□□□□□ -1.51
MSH6Q03834 SLC1YDL052C 912 nt5.61□□□□□ -1.51
MSH6Q03834 DTD1YDL219W 453 nt5.61□□□□□ -1.51
MSH6Q03834 NKP1YDR383C 717 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)CtN(GUU)C 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)FtN(GUU)F 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)GtN(GUU)G 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)KtN(GUU)K 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)LtN(GUU)L 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)N1tN(GUU)N1 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)N2tN(GUU)N2 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)O1tN(GUU)O1 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)O2tN(GUU)O2 74 nt5.61□□□□□ -1.51
MSH6Q03834 tN(GUU)PtN(GUU)P 74 nt5.61□□□□□ -1.51
MSH6Q03834 SSZ1YHR064C 1617 nt5.61□□□□□ -1.51
MSH6Q03834 CAP1YKL007W 807 nt5.61□□□□□ -1.51
MSH6Q03834 SEC13YLR208W 894 nt5.61□□□□□ -1.51
MSH6Q03834 YNL203CYNL203C 612 nt5.61□□□□□ -1.51
MSH6Q03834 RPT4YOR259C 1314 nt5.61□□□□□ -1.51
MSH6Q03834 COT1YOR316C 1320 nt5.61□□□□□ -1.51
MSH6Q03834 FRE3YOR381W 2136 nt5.61□□□□□ -1.51
MSH6Q03834 NUD1YOR373W 2556 nt5.61□□□□□ -1.51
MSH6Q03834 RTK1YDL025C 1863 nt5.6□□□□□ -1.51
MSH6Q03834 SIA1YOR137C 1869 nt5.6□□□□□ -1.51
MSH6Q03834 RHB1YCR027C 630 nt5.6□□□□□ -1.51
MSH6Q03834 GIR2YDR152W 798 nt5.6□□□□□ -1.51
MSH6Q03834 KEI1YDR367W 666 nt5.6□□□□□ -1.51
MSH6Q03834 YGR160WYGR160W 612 nt5.6□□□□□ -1.51
MSH6Q03834 YHL046W-AYHL046W-A 327 nt5.6□□□□□ -1.51
MSH6Q03834 HSX1tR(CCU)J 72 nt5.6□□□□□ -1.51
MSH6Q03834 TRS33YOR115C 807 nt5.6□□□□□ -1.51
MSH6Q03834 PMS1YNL082W 2622 nt5.6□□□□□ -1.51
MSH6Q03834 TDA3YHR009C 1572 nt5.59□□□□□ -1.51
MSH6Q03834 MMT1YMR177W 1533 nt5.59□□□□□ -1.51
MSH6Q03834 RAD18YCR066W 1464 nt5.59□□□□□ -1.51
MSH6Q03834 ENT1YDL161W 1365 nt5.59□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms