Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 AC144652.1-201ENST00000609974 1624 ntBASIC16.66■□□□□ 0.26
HIST1H1AQ02539 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1AQ02539 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.65■□□□□ 0.26
HIST1H1AQ02539 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HIST1H1AQ02539 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HIST1H1AQ02539 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
HIST1H1AQ02539 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 Z92544.1-202ENST00000571933 1220 ntBASIC16.64■□□□□ 0.25
HIST1H1AQ02539 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 AC092028.1-203ENST00000608262 953 ntBASIC16.64■□□□□ 0.25
HIST1H1AQ02539 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 RNF165-205ENST00000588679 2904 ntBASIC16.64■□□□□ 0.25
HIST1H1AQ02539 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H1AQ02539 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 MIR4787-201ENST00000607364 84 ntBASIC16.63■□□□□ 0.25
HIST1H1AQ02539 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H1AQ02539 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 TSPY9P-201ENST00000440215 945 ntBASIC16.62■□□□□ 0.25
HIST1H1AQ02539 TSPY11P-201ENST00000442607 1045 ntBASIC16.62■□□□□ 0.25
HIST1H1AQ02539 AC239859.2-201ENST00000444165 318 ntBASIC16.62■□□□□ 0.25
HIST1H1AQ02539 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.62■□□□□ 0.25
HIST1H1AQ02539 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H1AQ02539 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H1AQ02539 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms