Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFNB1P98172 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNB1P98172 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.66■□□□□ 0.74
EFNB1P98172 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.66■□□□□ 0.74
EFNB1P98172 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
EFNB1P98172 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.66■□□□□ 0.74
EFNB1P98172 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNB1P98172 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.66■□□□□ 0.74
EFNB1P98172 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNB1P98172 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNB1P98172 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNB1P98172 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 AC103724.3-201ENST00000564481 992 ntBASIC19.65■□□□□ 0.74
EFNB1P98172 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNB1P98172 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNB1P98172 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB1P98172 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
EFNB1P98172 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.64■□□□□ 0.74
EFNB1P98172 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFNB1P98172 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFNB1P98172 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.64■□□□□ 0.73
EFNB1P98172 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.64■□□□□ 0.73
EFNB1P98172 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB1P98172 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB1P98172 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB1P98172 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB1P98172 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB1P98172 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.63■□□□□ 0.73
EFNB1P98172 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EFNB1P98172 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNB1P98172 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.63■□□□□ 0.73
EFNB1P98172 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB1P98172 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB1P98172 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
EFNB1P98172 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB1P98172 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.62■□□□□ 0.73
EFNB1P98172 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB1P98172 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
EFNB1P98172 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB1P98172 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB1P98172 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.62■□□□□ 0.73
EFNB1P98172 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.62■□□□□ 0.73
EFNB1P98172 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.62■□□□□ 0.73
EFNB1P98172 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
EFNB1P98172 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.61■□□□□ 0.73
EFNB1P98172 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNB1P98172 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNB1P98172 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB1P98172 AC004687.1-201ENST00000579003 1625 ntBASIC19.61■□□□□ 0.73
EFNB1P98172 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EFNB1P98172 AC021242.3-201ENST00000607598 1377 ntBASIC19.6■□□□□ 0.73
EFNB1P98172 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.6■□□□□ 0.73
EFNB1P98172 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.6■□□□□ 0.73
EFNB1P98172 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
EFNB1P98172 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB1P98172 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNB1P98172 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB1P98172 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB1P98172 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB1P98172 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB1P98172 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.59■□□□□ 0.73
EFNB1P98172 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNB1P98172 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms