Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ACTA1P68133 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTA1P68133 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.5■□□□□ 0.71
ACTA1P68133 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTA1P68133 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.5■□□□□ 0.71
ACTA1P68133 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTA1P68133 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ACTA1P68133 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.49■□□□□ 0.71
ACTA1P68133 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ACTA1P68133 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ACTA1P68133 AC010542.4-201ENST00000563151 1910 ntBASIC19.49■□□□□ 0.71
ACTA1P68133 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 AL033527.3-201ENST00000566366 1196 ntBASIC19.48■□□□□ 0.71
ACTA1P68133 DUX4L4-201ENST00000566884 1269 ntBASIC19.48■□□□□ 0.71
ACTA1P68133 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.48■□□□□ 0.71
ACTA1P68133 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.48■□□□□ 0.71
ACTA1P68133 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 FAM99A-202ENST00000538190 1989 ntBASIC19.48■□□□□ 0.71
ACTA1P68133 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.48■□□□□ 0.71
ACTA1P68133 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ACTA1P68133 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ACTA1P68133 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.47■□□□□ 0.71
ACTA1P68133 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.47■□□□□ 0.71
ACTA1P68133 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 MIR6722-201ENST00000617286 78 ntBASIC19.47■□□□□ 0.71
ACTA1P68133 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.47■□□□□ 0.71
ACTA1P68133 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
ACTA1P68133 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ACTA1P68133 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.47■□□□□ 0.71
ACTA1P68133 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
ACTA1P68133 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ACTA1P68133 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.46■□□□□ 0.71
ACTA1P68133 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTA1P68133 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ACTA1P68133 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.46■□□□□ 0.71
ACTA1P68133 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ACTA1P68133 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
ACTA1P68133 AC026310.3-201ENST00000625186 2373 ntBASIC19.46■□□□□ 0.71
ACTA1P68133 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.45■□□□□ 0.7
ACTA1P68133 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTA1P68133 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTA1P68133 AC137630.3-201ENST00000607245 391 ntBASIC19.45■□□□□ 0.7
ACTA1P68133 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ACTA1P68133 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ACTA1P68133 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.44■□□□□ 0.7
ACTA1P68133 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.44■□□□□ 0.7
ACTA1P68133 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTA1P68133 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.44■□□□□ 0.7
ACTA1P68133 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.44■□□□□ 0.7
ACTA1P68133 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.44■□□□□ 0.7
ACTA1P68133 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTA1P68133 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTA1P68133 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
ACTA1P68133 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTA1P68133 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTA1P68133 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ACTA1P68133 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ACTA1P68133 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ACTA1P68133 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTA1P68133 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.43■□□□□ 0.7
ACTA1P68133 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTA1P68133 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTA1P68133 AL024507.2-201ENST00000606070 2574 ntBASIC19.43■□□□□ 0.7
ACTA1P68133 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTA1P68133 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTA1P68133 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTA1P68133 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
ACTA1P68133 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTA1P68133 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTA1P68133 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTA1P68133 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
ACTA1P68133 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTA1P68133 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ACTA1P68133 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.42■□□□□ 0.7
ACTA1P68133 CA15P2-201ENST00000611168 834 ntBASIC19.42■□□□□ 0.7
ACTA1P68133 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ACTA1P68133 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms