Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4XP62701 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4XP62701 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RPS4XP62701 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4XP62701 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RPS4XP62701 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4XP62701 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 AC004687.1-201ENST00000579003 1625 ntBASIC19.8■□□□□ 0.76
RPS4XP62701 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPS4XP62701 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.8■□□□□ 0.76
RPS4XP62701 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
RPS4XP62701 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.8■□□□□ 0.76
RPS4XP62701 AL499627.2-201ENST00000606283 725 ntBASIC19.8■□□□□ 0.76
RPS4XP62701 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.8■□□□□ 0.76
RPS4XP62701 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4XP62701 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
RPS4XP62701 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RPS4XP62701 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPS4XP62701 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4XP62701 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4XP62701 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RPS4XP62701 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4XP62701 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 PBX2P1-201ENST00000493219 1291 ntBASIC19.78■□□□□ 0.76
RPS4XP62701 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS4XP62701 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4XP62701 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
RPS4XP62701 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4XP62701 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS4XP62701 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4XP62701 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
RPS4XP62701 SRD5A1P1-201ENST00000442297 786 ntBASIC19.77■□□□□ 0.76
RPS4XP62701 AC106739.1-201ENST00000617035 715 ntBASIC19.77■□□□□ 0.76
RPS4XP62701 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.77■□□□□ 0.75
RPS4XP62701 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPS4XP62701 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPS4XP62701 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RPS4XP62701 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RPS4XP62701 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.76■□□□□ 0.75
RPS4XP62701 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.76■□□□□ 0.75
RPS4XP62701 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RPS4XP62701 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.76■□□□□ 0.75
RPS4XP62701 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4XP62701 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RPS4XP62701 CLDN5-201ENST00000403084 2357 ntBASIC19.75■□□□□ 0.75
RPS4XP62701 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.75■□□□□ 0.75
RPS4XP62701 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 CA15P2-201ENST00000611168 834 ntBASIC19.75■□□□□ 0.75
RPS4XP62701 AC241377.3-202ENST00000626088 1088 ntBASIC19.75■□□□□ 0.75
RPS4XP62701 AC241585.3-202ENST00000628937 1088 ntBASIC19.75■□□□□ 0.75
RPS4XP62701 AC245100.8-202ENST00000629247 1058 ntBASIC19.75■□□□□ 0.75
RPS4XP62701 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms