Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
EIF4A1P60842 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
EIF4A1P60842 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
EIF4A1P60842 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.26■■■□□ 2.11
EIF4A1P60842 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
EIF4A1P60842 AC022517.1-201ENST00000592429 346 ntBASIC28.26■■■□□ 2.11
EIF4A1P60842 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 OXCT2P1-201ENST00000447263 1535 ntBASIC28.26■■■□□ 2.11
EIF4A1P60842 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
EIF4A1P60842 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
EIF4A1P60842 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.25■■■□□ 2.11
EIF4A1P60842 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.25■■■□□ 2.11
EIF4A1P60842 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
EIF4A1P60842 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
EIF4A1P60842 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.25■■■□□ 2.11
EIF4A1P60842 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
EIF4A1P60842 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
EIF4A1P60842 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
EIF4A1P60842 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
EIF4A1P60842 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
EIF4A1P60842 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.24■■■□□ 2.11
EIF4A1P60842 AC087239.1-201ENST00000622671 572 ntBASIC28.24■■■□□ 2.11
EIF4A1P60842 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
EIF4A1P60842 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
EIF4A1P60842 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
EIF4A1P60842 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
EIF4A1P60842 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.23■■■□□ 2.11
EIF4A1P60842 IKBKGP1-201ENST00000612193 1073 ntBASIC28.23■■■□□ 2.11
EIF4A1P60842 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
EIF4A1P60842 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
EIF4A1P60842 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.22■■■□□ 2.11
EIF4A1P60842 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.22■■■□□ 2.11
EIF4A1P60842 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
EIF4A1P60842 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.22■■■□□ 2.11
EIF4A1P60842 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
EIF4A1P60842 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
EIF4A1P60842 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
EIF4A1P60842 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.21■■■□□ 2.11
EIF4A1P60842 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
EIF4A1P60842 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.21■■■□□ 2.11
EIF4A1P60842 KRT18P61-201ENST00000585825 1298 ntBASIC28.21■■■□□ 2.11
EIF4A1P60842 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.21■■■□□ 2.11
EIF4A1P60842 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
EIF4A1P60842 BX005040.4-201ENST00000637145 1518 ntBASIC28.21■■■□□ 2.11
EIF4A1P60842 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
EIF4A1P60842 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
EIF4A1P60842 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
EIF4A1P60842 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
EIF4A1P60842 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.2■■■□□ 2.1
EIF4A1P60842 NTF6G-201ENST00000591094 616 ntBASIC28.2■■■□□ 2.1
EIF4A1P60842 AC092437.1-201ENST00000624794 1048 ntBASIC28.2■■■□□ 2.1
EIF4A1P60842 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
EIF4A1P60842 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
EIF4A1P60842 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
EIF4A1P60842 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.19■■■□□ 2.1
EIF4A1P60842 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
EIF4A1P60842 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.19■■■□□ 2.1
EIF4A1P60842 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
EIF4A1P60842 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.19■■■□□ 2.1
EIF4A1P60842 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.19■■■□□ 2.1
EIF4A1P60842 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
EIF4A1P60842 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.18■■■□□ 2.1
EIF4A1P60842 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.18■■■□□ 2.1
EIF4A1P60842 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
EIF4A1P60842 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
EIF4A1P60842 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
EIF4A1P60842 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
EIF4A1P60842 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
EIF4A1P60842 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.17■■■□□ 2.1
EIF4A1P60842 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.17■■■□□ 2.1
EIF4A1P60842 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.17■■■□□ 2.1
EIF4A1P60842 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.17■■■□□ 2.1
EIF4A1P60842 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.17■■■□□ 2.1
EIF4A1P60842 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.17■■■□□ 2.1
EIF4A1P60842 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
EIF4A1P60842 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
EIF4A1P60842 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
EIF4A1P60842 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.16■■■□□ 2.1
EIF4A1P60842 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.16■■■□□ 2.1
EIF4A1P60842 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.16■■■□□ 2.1
EIF4A1P60842 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
EIF4A1P60842 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
EIF4A1P60842 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.15■■■□□ 2.1
EIF4A1P60842 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
EIF4A1P60842 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms