Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.24■□□□□ 0.67
DEFA1P59665 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DEFA1P59665 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DEFA1P59665 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.23■□□□□ 0.67
DEFA1P59665 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
DEFA1P59665 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.23■□□□□ 0.67
DEFA1P59665 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DEFA1P59665 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
DEFA1P59665 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DEFA1P59665 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.22■□□□□ 0.67
DEFA1P59665 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
DEFA1P59665 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DEFA1P59665 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.22■□□□□ 0.67
DEFA1P59665 AC244015.2-201ENST00000616358 1861 ntBASIC19.22■□□□□ 0.67
DEFA1P59665 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DEFA1P59665 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DEFA1P59665 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.22■□□□□ 0.67
DEFA1P59665 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 AF106564.1-201ENST00000607058 2553 ntBASIC19.21■□□□□ 0.67
DEFA1P59665 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DEFA1P59665 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.21■□□□□ 0.67
DEFA1P59665 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.2■□□□□ 0.66
DEFA1P59665 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DEFA1P59665 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.19■□□□□ 0.66
DEFA1P59665 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DEFA1P59665 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DEFA1P59665 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DEFA1P59665 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
DEFA1P59665 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DEFA1P59665 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.19■□□□□ 0.66
DEFA1P59665 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DEFA1P59665 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
DEFA1P59665 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.19■□□□□ 0.66
DEFA1P59665 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.18■□□□□ 0.66
DEFA1P59665 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
DEFA1P59665 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
DEFA1P59665 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.18■□□□□ 0.66
DEFA1P59665 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.18■□□□□ 0.66
DEFA1P59665 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.18■□□□□ 0.66
DEFA1P59665 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
DEFA1P59665 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.18■□□□□ 0.66
DEFA1P59665 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DEFA1P59665 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.17■□□□□ 0.66
DEFA1P59665 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
DEFA1P59665 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.17■□□□□ 0.66
DEFA1P59665 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.17■□□□□ 0.66
DEFA1P59665 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DEFA1P59665 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DEFA1P59665 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DEFA1P59665 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.17■□□□□ 0.66
DEFA1P59665 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DEFA1P59665 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms