Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VSX2P58304 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.96■□□□□ 0.95
VSX2P58304 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.95■□□□□ 0.94
VSX2P58304 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VSX2P58304 IRS3P-201ENST00000223076 1006 ntBASIC20.95■□□□□ 0.94
VSX2P58304 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VSX2P58304 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSX2P58304 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.94■□□□□ 0.94
VSX2P58304 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSX2P58304 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.94■□□□□ 0.94
VSX2P58304 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.94■□□□□ 0.94
VSX2P58304 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VSX2P58304 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSX2P58304 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSX2P58304 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.94■□□□□ 0.94
VSX2P58304 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
VSX2P58304 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
VSX2P58304 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.93■□□□□ 0.94
VSX2P58304 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.93■□□□□ 0.94
VSX2P58304 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.93■□□□□ 0.94
VSX2P58304 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VSX2P58304 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.93■□□□□ 0.94
VSX2P58304 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSX2P58304 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
VSX2P58304 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.92■□□□□ 0.94
VSX2P58304 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.92■□□□□ 0.94
VSX2P58304 AL031602.1-201ENST00000633169 911 ntBASIC20.92■□□□□ 0.94
VSX2P58304 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.92■□□□□ 0.94
VSX2P58304 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.92■□□□□ 0.94
VSX2P58304 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.92■□□□□ 0.94
VSX2P58304 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSX2P58304 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.91■□□□□ 0.94
VSX2P58304 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
VSX2P58304 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.91■□□□□ 0.94
VSX2P58304 AC068587.7-201ENST00000641602 218 ntBASIC20.91■□□□□ 0.94
VSX2P58304 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VSX2P58304 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
VSX2P58304 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VSX2P58304 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
VSX2P58304 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.9■□□□□ 0.94
VSX2P58304 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VSX2P58304 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.9■□□□□ 0.94
VSX2P58304 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VSX2P58304 AC087239.1-201ENST00000622671 572 ntBASIC20.9■□□□□ 0.94
VSX2P58304 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VSX2P58304 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VSX2P58304 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
VSX2P58304 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VSX2P58304 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VSX2P58304 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.9■□□□□ 0.94
VSX2P58304 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
VSX2P58304 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.89■□□□□ 0.94
VSX2P58304 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VSX2P58304 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
VSX2P58304 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSX2P58304 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VSX2P58304 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSX2P58304 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.89■□□□□ 0.93
VSX2P58304 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSX2P58304 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSX2P58304 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 LINC01960-201ENST00000563759 1884 ntBASIC20.88■□□□□ 0.93
VSX2P58304 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
VSX2P58304 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VSX2P58304 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.88■□□□□ 0.93
VSX2P58304 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSX2P58304 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms