Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN2P57739 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN2P57739 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.72■■□□□ 1.07
CLDN2P57739 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.72■■□□□ 1.07
CLDN2P57739 AC092437.1-201ENST00000624794 1048 ntBASIC21.72■■□□□ 1.07
CLDN2P57739 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CLDN2P57739 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
CLDN2P57739 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN2P57739 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CLDN2P57739 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CLDN2P57739 AC010141.3-201ENST00000456659 717 ntBASIC21.71■■□□□ 1.07
CLDN2P57739 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLDN2P57739 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.71■■□□□ 1.07
CLDN2P57739 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLDN2P57739 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN2P57739 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLDN2P57739 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLDN2P57739 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.7■■□□□ 1.07
CLDN2P57739 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN2P57739 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN2P57739 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.7■■□□□ 1.06
CLDN2P57739 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN2P57739 AL137784.2-201ENST00000607332 1000 ntBASIC21.7■■□□□ 1.06
CLDN2P57739 AC087239.1-201ENST00000622671 572 ntBASIC21.7■■□□□ 1.06
CLDN2P57739 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN2P57739 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
CLDN2P57739 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLDN2P57739 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN2P57739 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.7■■□□□ 1.06
CLDN2P57739 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN2P57739 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.69■■□□□ 1.06
CLDN2P57739 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN2P57739 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN2P57739 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN2P57739 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN2P57739 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN2P57739 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN2P57739 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN2P57739 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN2P57739 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN2P57739 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN2P57739 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN2P57739 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN2P57739 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
CLDN2P57739 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN2P57739 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN2P57739 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLDN2P57739 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN2P57739 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN2P57739 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN2P57739 SMUG1P1-201ENST00000590640 811 ntBASIC21.67■■□□□ 1.06
CLDN2P57739 TPRG1LP1-201ENST00000598702 760 ntBASIC21.67■■□□□ 1.06
CLDN2P57739 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLDN2P57739 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN2P57739 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN2P57739 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 AC092068.2-201ENST00000590491 1708 ntBASIC21.66■■□□□ 1.06
CLDN2P57739 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CLDN2P57739 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLDN2P57739 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 AC004911.1-201ENST00000416316 871 ntBASIC21.66■■□□□ 1.06
CLDN2P57739 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN2P57739 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN2P57739 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.66■■□□□ 1.06
CLDN2P57739 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CLDN2P57739 DUSP8P3-201ENST00000399571 1760 ntBASIC21.66■■□□□ 1.06
CLDN2P57739 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN2P57739 BX005040.4-201ENST00000637145 1518 ntBASIC21.65■■□□□ 1.06
CLDN2P57739 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN2P57739 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN2P57739 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CLDN2P57739 RARRES2P11-201ENST00000635158 484 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms