Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.12■□□□□ 0.81
PER3P56645 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PER3P56645 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.12■□□□□ 0.81
PER3P56645 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
PER3P56645 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
PER3P56645 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
PER3P56645 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
PER3P56645 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.12■□□□□ 0.81
PER3P56645 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PER3P56645 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PER3P56645 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.12■□□□□ 0.81
PER3P56645 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.11■□□□□ 0.81
PER3P56645 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.11■□□□□ 0.81
PER3P56645 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.11■□□□□ 0.81
PER3P56645 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.11■□□□□ 0.81
PER3P56645 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PER3P56645 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.1■□□□□ 0.81
PER3P56645 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.1■□□□□ 0.81
PER3P56645 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 MIR572-201ENST00000384983 95 ntBASIC20.1■□□□□ 0.81
PER3P56645 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
PER3P56645 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 IGHV3-19-201ENST00000521488 291 ntBASIC20.1■□□□□ 0.81
PER3P56645 AC012414.1-201ENST00000556676 535 ntBASIC20.1■□□□□ 0.81
PER3P56645 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.1■□□□□ 0.81
PER3P56645 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.1■□□□□ 0.81
PER3P56645 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
PER3P56645 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.1■□□□□ 0.81
PER3P56645 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.1■□□□□ 0.81
PER3P56645 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.1■□□□□ 0.81
PER3P56645 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PER3P56645 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.09■□□□□ 0.81
PER3P56645 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.09■□□□□ 0.81
PER3P56645 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PER3P56645 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER3P56645 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PER3P56645 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.08■□□□□ 0.81
PER3P56645 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.08■□□□□ 0.81
PER3P56645 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.08■□□□□ 0.81
PER3P56645 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.08■□□□□ 0.81
PER3P56645 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
PER3P56645 NTF6G-201ENST00000591094 616 ntBASIC20.08■□□□□ 0.81
PER3P56645 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.08■□□□□ 0.8
PER3P56645 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER3P56645 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER3P56645 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER3P56645 LINC00565-201ENST00000562710 2331 ntBASIC20.08■□□□□ 0.8
PER3P56645 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER3P56645 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PER3P56645 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.07■□□□□ 0.8
PER3P56645 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.07■□□□□ 0.8
PER3P56645 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.07■□□□□ 0.8
PER3P56645 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
PER3P56645 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PER3P56645 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PER3P56645 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER3P56645 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PER3P56645 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PER3P56645 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PER3P56645 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.06■□□□□ 0.8
PER3P56645 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PER3P56645 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms