Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXG1P55316 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXG1P55316 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXG1P55316 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
FOXG1P55316 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
FOXG1P55316 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.27■□□□□ 0.67
FOXG1P55316 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXG1P55316 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.27■□□□□ 0.67
FOXG1P55316 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXG1P55316 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXG1P55316 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXG1P55316 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXG1P55316 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXG1P55316 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 LINC01960-201ENST00000563759 1884 ntBASIC19.26■□□□□ 0.67
FOXG1P55316 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXG1P55316 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXG1P55316 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXG1P55316 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXG1P55316 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FOXG1P55316 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXG1P55316 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXG1P55316 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXG1P55316 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXG1P55316 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
FOXG1P55316 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXG1P55316 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXG1P55316 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FOXG1P55316 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXG1P55316 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
FOXG1P55316 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXG1P55316 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXG1P55316 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXG1P55316 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXG1P55316 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXG1P55316 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXG1P55316 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXG1P55316 IRS3P-201ENST00000223076 1006 ntBASIC19.23■□□□□ 0.67
FOXG1P55316 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
FOXG1P55316 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXG1P55316 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXG1P55316 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXG1P55316 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXG1P55316 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXG1P55316 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXG1P55316 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXG1P55316 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXG1P55316 AC087742.1-201ENST00000575880 1738 ntBASIC19.22■□□□□ 0.67
FOXG1P55316 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FOXG1P55316 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 MIR935-201ENST00000401179 91 ntBASIC19.22■□□□□ 0.67
FOXG1P55316 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXG1P55316 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXG1P55316 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
FOXG1P55316 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXG1P55316 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXG1P55316 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
FOXG1P55316 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXG1P55316 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXG1P55316 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXG1P55316 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXG1P55316 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXG1P55316 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXG1P55316 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXG1P55316 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXG1P55316 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXG1P55316 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXG1P55316 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXG1P55316 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXG1P55316 MIR572-201ENST00000384983 95 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms